Lineage structure concepts

Individual/kin
Population
Species
Population structure
Deme
Metapopulation
Lineage

Horizontal species concepts

Phenetic species concept
Biological species concept
Ecological species concept
Recognition species concept
Morphospecies

Vertical species concepts

Evolutionary species concept
Cladistic species concept
Paleopecies
Chronospecies

General systematics

Sympatric
Allopatric
Synchronic
Allochronic
Genus
Cladogenesis
Peripatric speciation (peripheral isolate, founder effect) speciation
Perapatric speciation (partial isolation)
Anagenesis
Variation
  Age
  Geography (cline, subspecies)
  Sexual dimorphism
  Individual (idiosynchratic)
Systematics
Taxonomy
Nomenclature
Holotype
Paratype
Hypodigm
Phylogeny

Phylogenetic reconstruction

Cladogram
Phylogenetic tree
  Comparative anatomy
  Comparative biochemistry
    Immunology
    Protein sequencing
    DNA hybridization
  Fossil anatomy
  Individual (idiosynchratic)
Homology
Analogy
Classification
Convergence/homoplasy
derived character
Shared derived/synapomorphy
Uniquely derived/autapomorphy
Shared primitive/sympleisiomorphy
Convergently acquired/homoplastic/analogous
polarity (for cladistic analysis)
Phenetic system of classification
Cladistic system of classification
  Clade
  Paraphyletic group
  Polyphyletic group
Evolutionary taxonomy
  Stratophenetics